STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RNF207Ring finger protein 207a. (564 aa)    
Predicted Functional Partners:
LOC103467258
Hairy-related 12.
    
 
 0.685
nol9
Nucleolar protein 9.
      
 0.681
LOC103477588
Hairy and enhancer of split related-7.
    
 
 0.635
ppil2
Peptidylprolyl isomerase (cyclophilin)-like 2.
     
 0.539
rffl
Ring finger and FYVE-like domain containing E3 ubiquitin protein ligase.
      
 0.523
LOC103467277
G protein-coupled receptor 153.
    
 
 0.481
gins3
GINS complex subunit 3.
      
 0.475
thoc7
THO complex 7.
      
 0.471
grik5
Glutamate receptor, ionotropic, kainate 5.
      
 0.468
LOC103472527
Uncharacterized protein.
      
 0.468
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.