STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
emsyEMSY transcriptional repressor, BRCA2 interacting. (1277 aa)    
Predicted Functional Partners:
phf12
PHD finger protein 12b.
   
 
 0.859
gatad1
GATA zinc finger domain containing 1.
    
 
 0.744
sin3b
SIN3 transcription regulator family member B.
    
 
 0.707
tonsl
Tonsoku-like, DNA repair protein.
   
 
 0.684
LOC103462700
SIN3 transcription regulator family member Ab.
    
 
 0.683
sin3a
SIN3 transcription regulator family member Aa.
    
 
 0.683
aptx
Aprataxin.
      
 0.681
LOC103462110
MRG domain-containing protein.
   
 
 0.675
LOC103466532
Mortality factor 4 like 1.
   
 
 0.675
brca2
BRCA2 DNA repair associated.
    
 
 0.671
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.