STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
nf1Neurofibromin 1b. (2742 aa)    
Predicted Functional Partners:
LOC103469088
Zgc:55558.
   
 0.977
kras
V-Ki-ras2 Kirsten rat sarcoma viral oncogene homolog.
   
 0.977
hras
HRas proto-oncogene, GTPase a.
   
 0.977
LOC103468146
RAS related.
   
 0.964
mras
Muscle RAS oncogene homolog.
   
 0.964
rras2
RAS related 2.
   
 0.964
mad2l1
MAD2 mitotic arrest deficient-like 1 (yeast).
   
 0.933
spred1
Sprouty related EVH1 domain containing 1.
    
 0.920
anapc4
Anaphase-promoting complex subunit 4; Component of the anaphase promoting complex/cyclosome (APC/C), a cell cycle-regulated E3 ubiquitin ligase that controls progression through mitosis and the G1 phase of the cell cycle. Belongs to the APC4 family.
    
 0.909
anapc1
Anaphase promoting complex subunit 1.
    
 0.908
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.