STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC103464156Deoxyribonuclease II beta. (352 aa)    
Predicted Functional Partners:
bloc1s1
Biogenesis of lysosomal organelles complex-1, subunit 1.
   
 
  0.609
gns
N-acetylglucosamine-6-sulfatase; Belongs to the sulfatase family.
   
 0.527
LOC103473209
N-acetylglucosamine-6-sulfatase; Belongs to the sulfatase family.
   
 0.527
LOC103478890
AP-1 complex subunit gamma.
     
 0.460
ap1g1
AP-1 complex subunit gamma.
     
 0.460
ENSPREP00000022754
Vesicle-associated membrane protein 8 (endobrevin).
     
 0.424
ENSPREP00000022805
V-SNARE coiled-coil homology domain-containing protein.
     
 0.424
LOC103471866
Pept_C1 domain-containing protein; Belongs to the peptidase C1 family.
   
 
 0.415
ctsz
Cathepsin Z; Belongs to the peptidase C1 family.
   
 
 0.415
LOC103479906
Pept_C1 domain-containing protein; Belongs to the peptidase C1 family.
   
 
 0.415
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.