STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC103461081Vir like m6A methyltransferase associated. (910 aa)    
Predicted Functional Partners:
zc3h13
Zinc finger CCCH-type containing 13.
   
 
 0.939
wtap
WT1 associated protein.
    
 
 0.937
virma
Uncharacterized protein.
 
      0.900
cbll1
Cbl proto-oncogene-like 1, E3 ubiquitin protein ligase.
    
 
 0.871
thoc2
THO complex 2.
   
 
 0.693
mettl14
Methyltransferase like 14; Belongs to the MT-A70-like family.
    
 
 0.622
rbm15
RNA binding motif protein 15.
    
 
 0.601
YTHDC2
YTH domain containing 2.
    
 
 0.566
ENSPREP00000007854
Uncharacterized protein.
    
 
 0.556
LOC103480536
Methyltransferase like 3; Belongs to the MT-A70-like family.
    
 
 0.556
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.