STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC103475012Motilin receptor; Belongs to the G-protein coupled receptor 1 family. (306 aa)    
Predicted Functional Partners:
nts
Neurotensin.
    
 0.712
nmu
NMU domain-containing protein.
    
 0.655
edn1
Endothelin 1.
    
  0.604
LOC103465492
Uncharacterized protein.
    
  0.596
LOC103478316
Cholecystokinin a.
    
 0.595
cck
Gastrin domain-containing protein.
    
 0.595
f2
Prothrombin; Thrombin, which cleaves bonds after Arg and Lys, converts fibrinogen to fibrin and activates factors V, VII, VIII, XIII, and, in complex with thrombomodulin, protein C. Functions in blood homeostasis, inflammation and wound healing; Belongs to the peptidase S1 family.
    
  0.540
ENSPREP00000024835
END domain-containing protein.
    
  0.528
agt
Angiotensinogen; Belongs to the serpin family.
    
  0.509
Prok1
Prokineticin 1.
     
 0.493
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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