STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC103464789Tribbles pseudokinase 3. (351 aa)    
Predicted Functional Partners:
LOC103477731
Activating transcription factor 4a.
    
 0.820
cop1
COP1 E3 ubiquitin ligase.
    
 
 0.805
LOC103474789
Non-specific serine/threonine protein kinase; Belongs to the protein kinase superfamily.
   
0.748
LOC103476681
Non-specific serine/threonine protein kinase; Belongs to the protein kinase superfamily.
   
0.748
chac1
Gamma-glutamylcyclotransferase; Catalyzes the cleavage of glutathione into 5-oxo-L-proline and a Cys-Gly dipeptide. Acts specifically on glutathione, but not on other gamma-glutamyl peptides; Belongs to the gamma-glutamylcyclotransferase family.
   
 
 0.748
LOC103458505
Gamma-glutamylcyclotransferase; Catalyzes the cleavage of glutathione into 5-oxo-L-proline and a Cys-Gly dipeptide. Acts specifically on glutathione, but not on other gamma-glutamyl peptides; Belongs to the gamma-glutamylcyclotransferase family.
   
 
 0.748
LOC103470003
Non-specific serine/threonine protein kinase; Belongs to the protein kinase superfamily.
   
0.748
akt1
Non-specific serine/threonine protein kinase; Belongs to the protein kinase superfamily.
   
0.748
stk40
Serine/threonine kinase 40.
    
 
0.721
ENSPREP00000000839
Protein kinase, AMP-activated, beta 1 non-catalytic subunit, a.
    
 0.719
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.