STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
spoplSpeckle type BTB/POZ protein like b. (392 aa)    
Predicted Functional Partners:
LOC103479391
CULLIN_2 domain-containing protein; Belongs to the cullin family.
   
 0.993
LOC103474461
Cullin 3; Belongs to the cullin family.
   
 0.993
gli2
GLI family zinc finger 2a.
   
 0.972
gli1
GLI family zinc finger 1.
   
 0.972
sufu
Suppressor of fused homolog.
     
 0.938
SPOP
Speckle type BTB/POZ protein.
  
  
 
0.900
cul1
Cullin 1b; Belongs to the cullin family.
   
 0.884
cacul1
CDK2 associated cullin domain 1; Belongs to the cullin family.
   
 0.832
ube2i
Ubiquitin-conjugating enzyme E2Ib; Belongs to the ubiquitin-conjugating enzyme family.
    
 
 0.780
LOC103468487
UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family.
    
 
 0.780
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.