Ngrn protein (Poecilia reticulata) - STRING interaction network

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

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second shell of interactors

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proteins of unknown 3D structure

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Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

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[Homology]

Score

Ngrn

Uncharacterized protein. (296 aa)

Predicted Functional Partners:

fastkd2

0.789

trub2

0.671

LOC103465136

0.654

LOC103462163

0.586

ddx28

0.561

gtpbp10

0.556

actr8

0.531

mrm3

0.479

rcc1l

0.477

smim4

0.422

Your Current Organism:

Poecilia reticulata

NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
LOC103462163	LOC103465136	ENSPREP00000000042	ENSPREP00000008325	Pentatricopeptide repeat domain 1.	RNA pseudouridine synthase D4.	0.593
LOC103462163	Ngrn	ENSPREP00000000042	ENSPREP00000021685	Pentatricopeptide repeat domain 1.	Uncharacterized protein.	0.586
LOC103462163	ddx28	ENSPREP00000000042	ENSPREP00000004087	Pentatricopeptide repeat domain 1.	DEAD (Asp-Glu-Ala-Asp) box polypeptide 28.	0.518
LOC103462163	fastkd2	ENSPREP00000000042	ENSPREP00000015239	Pentatricopeptide repeat domain 1.	FAST kinase domains 2.	0.697
LOC103462163	mrm3	ENSPREP00000000042	ENSPREP00000014670	Pentatricopeptide repeat domain 1.	SpoU_sub_bind domain-containing protein.	0.526
LOC103462163	trub2	ENSPREP00000000042	ENSPREP00000003557	Pentatricopeptide repeat domain 1.	TruB pseudouridine (psi) synthase family member 2.	0.477
LOC103465136	LOC103462163	ENSPREP00000008325	ENSPREP00000000042	RNA pseudouridine synthase D4.	Pentatricopeptide repeat domain 1.	0.593
LOC103465136	Ngrn	ENSPREP00000008325	ENSPREP00000021685	RNA pseudouridine synthase D4.	Uncharacterized protein.	0.654
LOC103465136	ddx28	ENSPREP00000008325	ENSPREP00000004087	RNA pseudouridine synthase D4.	DEAD (Asp-Glu-Ala-Asp) box polypeptide 28.	0.590
LOC103465136	fastkd2	ENSPREP00000008325	ENSPREP00000015239	RNA pseudouridine synthase D4.	FAST kinase domains 2.	0.664
LOC103465136	gtpbp10	ENSPREP00000008325	ENSPREP00000024283	RNA pseudouridine synthase D4.	GTP-binding protein 10 (putative).	0.562
LOC103465136	mrm3	ENSPREP00000008325	ENSPREP00000014670	RNA pseudouridine synthase D4.	SpoU_sub_bind domain-containing protein.	0.855
LOC103465136	rcc1l	ENSPREP00000008325	ENSPREP00000021243	RNA pseudouridine synthase D4.	RCC1 like.	0.405
LOC103465136	trub2	ENSPREP00000008325	ENSPREP00000003557	RNA pseudouridine synthase D4.	TruB pseudouridine (psi) synthase family member 2.	0.635
Ngrn	LOC103462163	ENSPREP00000021685	ENSPREP00000000042	Uncharacterized protein.	Pentatricopeptide repeat domain 1.	0.586
Ngrn	LOC103465136	ENSPREP00000021685	ENSPREP00000008325	Uncharacterized protein.	RNA pseudouridine synthase D4.	0.654
Ngrn	actr8	ENSPREP00000021685	ENSPREP00000033984	Uncharacterized protein.	Actin-related protein 8; Plays an important role in the functional organization of mitotic chromosomes. Exhibits low basal ATPase activity, and unable to polymerize; Belongs to the actin family. ARP8 subfamily.	0.531
Ngrn	ddx28	ENSPREP00000021685	ENSPREP00000004087	Uncharacterized protein.	DEAD (Asp-Glu-Ala-Asp) box polypeptide 28.	0.561
Ngrn	fastkd2	ENSPREP00000021685	ENSPREP00000015239	Uncharacterized protein.	FAST kinase domains 2.	0.789
Ngrn	gtpbp10	ENSPREP00000021685	ENSPREP00000024283	Uncharacterized protein.	GTP-binding protein 10 (putative).	0.556