STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC103471472Xylosylprotein beta 1,4-galactosyltransferase, polypeptide 7 (galactosyltransferase I). (229 aa)    
Predicted Functional Partners:
b3galt6
Hexosyltransferase.
    
 0.964
xylt2
Xylosyltransferase II.
     
 0.952
xylt1
Xylosyltransferase I.
     
 0.937
LOC103469073
Xylosyltransferase I.
     
 0.937
LOC103478412
Syndecan; Cell surface proteoglycan; Belongs to the syndecan proteoglycan family.
     
 0.633
uxs1
UDP-glucuronate decarboxylase 1.
   
  
 0.602
mgp
Gla domain-containing protein.
      
 0.597
bmp2
Bone morphogenetic protein 2b.
      
 0.597
LOC103482029
TGF_BETA_2 domain-containing protein.
      
 0.597
LOC103474638
Bone morphogenetic protein 16.
      
 0.597
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.