STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC103456667Uncharacterized protein. (114 aa)    
Predicted Functional Partners:
ENSPREP00000014094
NDK domain-containing protein.
    
 0.756
bub3
BUB3 mitotic checkpoint protein.
   
 
 0.735
ENSPREP00000032211
Robl_LC7 domain-containing protein.
  
 
 0.730
tctex1d2
Tctex1 domain containing 2.
    
 
 0.690
dnal4
Dynein light chain.
   
 
 0.679
DYNLRB2
Dynein light chain roadblock.
   
 
 0.675
DYNLRB1
Dynein light chain roadblock-type 1.
   
 
 0.675
TCTEX1D1
Tctex1 domain containing 1.
    
 
 0.650
DYNC1I1
Dynein cytoplasmic 1 intermediate chain 1.
   
 
 0.627
LOC103458526
Dynein, cytoplasmic 1, intermediate chain 2a.
   
 
 0.627
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.