STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Stxbp5lWD_REPEATS_REGION domain-containing protein. (314 aa)    
Predicted Functional Partners:
LOC103461256
Syntaxin binding protein 5-like.
 
 
    0.865
snap25
Synaptosomal-associated protein; Belongs to the SNAP-25 family.
   
 
 0.678
ENSPREP00000009573
Synaptosomal-associated protein; Belongs to the SNAP-25 family.
   
 
 0.588
prkcz
Protein kinase C; Belongs to the protein kinase superfamily. AGC Ser/Thr protein kinase family. PKC subfamily.
    
 
 0.569
prkci
Protein kinase C; Belongs to the protein kinase superfamily. AGC Ser/Thr protein kinase family. PKC subfamily.
    
 
 0.569
LOC103457516
t-SNARE coiled-coil homology domain-containing protein.
    
 
 0.559
ENSPREP00000021283
t-SNARE coiled-coil homology domain-containing protein.
    
 
 0.559
stx11
Syntaxin 11a; Belongs to the syntaxin family.
    
 
 0.559
STX11
Syntaxin 11.
    
 
 0.553
STX19
Syntaxin 19.
    
 
 0.528
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
Server load: low (28%) [HD]