STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSPREP00000022258Glycine C-acetyltransferase. (345 aa)    
Predicted Functional Partners:
sord
Sorbitol dehydrogenase.
  
 
 0.722
alad
Uncharacterized protein; Belongs to the ALAD family.
    
 0.570
LOC103458637
L-threonine dehydrogenase 2.
  
 
 0.559
LOC103457629
L-threonine dehydrogenase.
  
 
 0.559
amt
Aminomethyltransferase; The glycine cleavage system catalyzes the degradation of glycine; Belongs to the GcvT family.
  
  
 0.546
kdsr
3-ketodihydrosphingosine reductase; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
     
 0.525
adhfe1
Alcohol dehydrogenase iron containing 1.
    
 0.522
sptssa
Serine palmitoyltransferase, small subunit A.
    
 0.516
tsta3
Tissue specific transplantation antigen P35B.
  
 
 0.473
sptssb
Serine palmitoyltransferase, small subunit B.
    
 0.467
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.