STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSPREP00000022277Transcription factor SOX. (373 aa)    
Predicted Functional Partners:
ENSPREP00000005246
Protein kinase domain-containing protein.
    
 0.680
LOC103477771
Protein argonaute-3; Required for RNA-mediated gene silencing (RNAi). Binds to short RNAs such as microRNAs (miRNAs) and represses the translation of mRNAs which are complementary to them. Lacks endonuclease activity and does not appear to cleave target mRNAs; Belongs to the argonaute family. Ago subfamily.
    
 0.537
LOC103473053
Uncharacterized protein; Belongs to the argonaute family.
    
 0.537
tcf7
Transcription factor 7.
    
0.511
lef1
Lymphoid enhancer-binding factor 1.
    
0.507
LOC103473609
POU domain protein.
    
 0.505
ctnnb1
Catenin (cadherin-associated protein), beta 1.
    
 0.500
ENSPREP00000030448
Leucine rich repeat containing 3.
      
 0.475
LOC103465321
Junction plakoglobin a.
    
 0.459
LOC103472282
Uncharacterized protein.
    
 0.459
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.