STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
fgfr1op2FGFR1 oncogene partner 2. (215 aa)    
Predicted Functional Partners:
slmap
Sarcolemma associated protein a.
    
 
 0.932
pdcd10
Programmed cell death 10b.
    
 
 0.929
LOC103481920
MOB family member 4, phocein.
    
 
 0.927
LOC103467551
Sarcolemma associated protein b.
    
 
 0.869
strip1
Striatin interacting protein 1.
    
 
 0.834
strip2
Striatin interacting protein 2.
    
 
 0.834
ppp2r1b
Protein phosphatase 2, regulatory subunit A, beta b.
    
 
 0.791
strn3
Striatin, calmodulin binding protein 3.
    
 
 0.701
LOC103472140
Striatin, calmodulin binding protein.
    
 
 0.701
STRN
Striatin.
    
 
 0.701
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.