STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ash2lAsh2 like, histone lysine methyltransferase complex subunit. (593 aa)    
Predicted Functional Partners:
rbbp5
Retinoblastoma binding protein 5.
    
 0.999
dpy30
Dpy-30 histone methyltransferase complex regulatory subunit.
    
 0.997
wdr5
WD repeat domain 5.
   
 0.983
setd1a
SET domain containing 1A, histone lysine methyltransferase.
    
 0.968
LOC103470662
Uncharacterized protein.
    
 0.968
setd1b
SET domain containing 1B, histone lysine methyltransferase a.
    
 0.968
LOC103475867
Lysine (K)-specific demethylase 6B, b.
    
 0.967
LOC103475798
Lysine (K)-specific demethylase 6A, like.
    
 0.967
kdm6b
Lysine (K)-specific demethylase 6B, a.
    
 0.967
kdm6a
Lysine (K)-specific demethylase 6A.
    
 0.967
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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