STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC103475683Hephaestin-like 1b; Belongs to the multicopper oxidase family. (1170 aa)    
Predicted Functional Partners:
ENSPREP00000003320
Solute carrier family 40 protein; May be involved in iron transport and iron homeostasis. Belongs to the ferroportin (FP) (TC 2.A.100) family. SLC40A subfamily.
    
 0.692
slc40a1
Solute carrier family 40 protein; May be involved in iron transport and iron homeostasis. Belongs to the ferroportin (FP) (TC 2.A.100) family. SLC40A subfamily.
    
 0.692
pros1
Protein S.
   
 0.570
atp7a
ATPase copper transporting alpha.
  
 
 0.542
atp7b
ATPase copper transporting beta.
  
 
 0.542
fga
Fibrinogen alpha chain.
   
 
 0.528
LOC103469251
FAM20C golgi associated secretory pathway kinase a.
    
  0.526
LOC103462095
Milk fat globule-EGF factor 8 protein a.
 
  
 0.518
edil3
EGF-like repeats and discoidin I-like domains 3a.
 
 
    0.515
mcfd2
Multiple coagulation factor deficiency 2.
     
 0.508
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.