STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC103464845Uncharacterized protein; Belongs to the DOCK family. (1871 aa)    
Predicted Functional Partners:
LOC103472297
Engulfment and cell motility 1.
  
 
 0.750
LOC103466819
Engulfment and cell motility 3.
    
 0.699
elmo2
Engulfment and cell motility 2.
    
 0.699
crkl
V-crk avian sarcoma virus CT10 oncogene homolog-like.
    
 0.697
crk
CRK proto-oncogene, adaptor protein.
    
 0.697
ENSPREP00000023825
SH2 domain-containing protein.
    
 0.697
RHOG
Ras homolog family member G.
   
 0.616
ENSPREP00000010679
Ras homolog gene family, member Gd.
   
 0.616
LOC103471173
Uncharacterized protein.
   
 0.616
CDC42
Cell division cycle 42.
   
 0.579
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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