STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
tomm40Translocase of outer mitochondrial membrane 40 homolog (yeast). (341 aa)    
Predicted Functional Partners:
tomm20
Translocase of outer mitochondrial membrane 20b.
   
 0.944
TOMM7
Translocase of outer mitochondrial membrane 7.
    
 0.926
ENSPREP00000023296
Uncharacterized protein.
   
 0.915
tomm70
Translocase of outer mitochondrial membrane 70 homolog A (S. cerevisiae).
    
 0.901
tomm6
Translocase of outer mitochondrial membrane 6 homolog (yeast).
    
 0.865
tomm5
Translocase of outer mitochondrial membrane 5 homolog (yeast).
   
 0.865
timm50
Mitochondrial import inner membrane translocase subunit TIM50; Essential component of the TIM23 complex, a complex that mediates the translocation of transit peptide-containing proteins across the mitochondrial inner membrane.
   
 0.825
LOC103465699
SAMM50 sorting and assembly machinery component.
    
 0.805
LOC103459709
Sorting and assembly machinery component 50 homolog, like.
    
 0.805
mtx3
Metaxin.
   
 0.788
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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