STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSPREP00000022458LAG1_DNAbind domain-containing protein. (78 aa)    
Predicted Functional Partners:
LOC103458631
Histone deacetylase 1; Responsible for the deacetylation of lysine residues on the N-terminal part of the core histones (H2A, H2B, H3 and H4). Histone deacetylation gives a tag for epigenetic repression and plays an important role in transcriptional regulation, cell cycle progression and developmental events. Histone deacetylases act via the formation of large multiprotein complexes.
     
  0.900
LOC103473440
Notch receptor 1a.
     
  0.900
LOC103468742
Notch receptor 3.
     
  0.900
notch1
Notch receptor 1b.
     
  0.900
LOC103467593
AXH domain-containing protein.
     
  0.900
atxn1
Ataxin 1a.
     
  0.900
LOC103463625
Notch receptor 2.
     
  0.900
LOC103469257
Recombination signal binding protein for immunoglobulin kappa J region a.
     
  0.900
LOC103466531
Uncharacterized protein.
     
  0.900
rbpj
Recombination signal binding protein for immunoglobulin kappa J region.
     
  0.900
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
Server load: low (26%) [HD]