STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC103469109Protein yippee-like; Belongs to the yippee family. (144 aa)    
Predicted Functional Partners:
wdr26
WD repeat domain 26b.
   
 
 0.675
LOC103468952
Coronin; Belongs to the WD repeat coronin family.
    
 
 0.656
sez6l2
Seizure related 6 homolog (mouse)-like 2.
   
  
 0.649
ENSPREP00000034105
Proline-rich transmembrane protein 2.
      
 0.646
ppp4c
Serine/threonine-protein phosphatase.
      
 0.642
kctd13
Potassium channel tetramerization domain containing 13.
      
 0.633
rmnd5b
Required for meiotic nuclear division 5 homolog B.
    
 
 0.628
ranbp9
RAN binding protein 9.
   
 
 0.568
ranbp10
RAN binding protein 10.
   
 
 0.568
LOC103469110
Glycerophosphodiester phosphodiesterase domain containing 3a.
 
 
  
 0.555
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.