STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC103482421Complement component 8, gamma polypeptide; Belongs to the calycin superfamily. Lipocalin family. (235 aa)    
Predicted Functional Partners:
C8A
Complement C8 alpha chain.
  
 0.989
c5
Anaphylatoxin-like domain-containing protein.
   
 0.952
c7
Complement component 7a.
   
 0.927
c6
Complement component 6.
   
 0.917
cdc73
Cell division cycle 73, Paf1/RNA polymerase II complex component, homolog (S. cerevisiae).
   
 0.800
c9
Complement component 9.
   
 0.793
c8b
Complement component 8, beta polypeptide.
   
 0.782
paf1
PAF1 homolog, Paf1/RNA polymerase II complex component.
   
 0.759
cinp
Cyclin-dependent kinase 2 interacting protein.
   
 0.709
ctr9
CTR9 homolog, Paf1/RNA polymerase II complex component.
   
 0.709
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.