STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC103476819Zinc finger protein 503. (569 aa)    
Predicted Functional Partners:
hif1an
Hypoxia inducible factor 1 subunit alpha inhibitor.
      
 0.550
LOC103468198
Insulin-like growth factor 2 mRNA binding protein 1.
      
 0.522
barhl2
BarH-like homeobox 2.
   
  
 0.474
fign
Fidgetin; Belongs to the AAA ATPase family.
      
 0.472
LOC103474257
AAA domain-containing protein.
      
 0.472
gtpbp10
GTP-binding protein 10 (putative).
      
 0.468
casc4
Cancer susceptibility candidate 4.
      
 0.468
tep1
Uncharacterized protein.
      
 0.426
tmed2
Transmembrane p24 trafficking protein 2.
      
 0.410
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.