STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC103477895Ig-like domain-containing protein. (424 aa)    
Predicted Functional Partners:
LOC103480173
Ependymin-like 1.
      
 0.681
LOC103474772
Galactosylgalactosylxylosylprotein 3-beta-glucuronosyltransferase; Belongs to the glycosyltransferase 43 family.
     
 0.486
nrg2
Neuregulin 2b.
     
 0.473
LOC103475452
Neuregulin 2a.
     
 0.473
aspa
Aspartoacylase.
   
  
 0.471
LOC103476319
5-hydroxytryptamine (serotonin) receptor 3A; Belongs to the ligand-gated ion channel (TC 1.A.9) family.
      
 0.470
tyrobp
Uncharacterized protein.
   
 0.443
LOC103470961
Matrin-type domain-containing protein.
  
 
  0.429
LOC103477570
Uncharacterized protein.
   
 
 0.428
LOC103481062
Fibronectin type-III domain-containing protein.
   
 
 0.428
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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