STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSPREP00000022901SUEL-type lectin domain-containing protein. (126 aa)    
Predicted Functional Partners:
unc5a
Unc-5 netrin receptor A.
   
 
 0.989
LOC103473771
Unc-5 netrin receptor C.
   
 
 0.989
unc5d
Unc-5 netrin receptor Db.
   
 
 0.989
LOC103470231
Unc-5 netrin receptor C.
   
 
 0.989
LOC103473501
Unc-5 netrin receptor Da.
   
 
 0.989
frmd6
FERM domain containing 6.
    
   0.911
frmd1
FERM domain-containing protein.
    
   0.911
SZRD1
SUZ RNA binding domain containing 1.
    
 
 0.910
ENSPREP00000014740
Teneurin N-terminal domain-containing protein.
    
 
 0.910
LOC103471835
Si:dkey-237h12.3.
    
 
 0.910
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.