STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSPREP00000022956AMP-binding domain-containing protein. (337 aa)    
Predicted Functional Partners:
LOC103462053
Solute carrier family 27 member 2a.
  
 
 
0.918
LOC103462052
Uncharacterized protein.
  
  
 
0.903
bbs1
Bardet-Biedl syndrome 1.
   
 0.808
bbs7
Bardet-Biedl syndrome 7.
   
 0.808
bbs9
Bardet-Biedl syndrome 9.
   
 0.807
ttc8
Tetratricopeptide repeat domain 8.
   
 0.776
bbs4
Bardet-Biedl syndrome 4.
   
 0.773
LOC103470579
Kinesin-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.
   
 0.656
ENSPREP00000022995
AMP-binding domain-containing protein.
 
     0.649
scp2
Uncharacterized protein; Belongs to the thiolase-like superfamily. Thiolase family.
  
 
 0.645
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.