STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
nudt5Nudix (nucleoside diphosphate linked moiety X)-type motif 5. (218 aa)    
Predicted Functional Partners:
nudt9
Nudix (nucleoside diphosphate linked moiety X)-type motif 9.
    
 0.957
pgm1
Phosphoglucomutase 1; Belongs to the phosphohexose mutase family.
   
 
 0.909
prps1
Phosphoribosyl pyrophosphate synthetase 1B.
  
 
 0.908
prps2
Pribosyltran_N domain-containing protein.
  
 
 0.908
LOC103460982
Phosphoribosyl pyrophosphate synthetase 2.
  
 
 0.908
pgm2
Phosphoglucomutase 2.
  
 
  0.904
adprm
ADP-ribose/CDP-alcohol diphosphatase, manganese-dependent.
    
 0.903
dcp1a
Decapping mRNA 1A.
    
 0.712
dcp1b
Decapping mRNA 1B.
    
 0.712
xrn1
5'-3' exoribonuclease 1.
   
 0.705
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.