STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TMEM47Transmembrane protein 47. (187 aa)    
Predicted Functional Partners:
C2CD4C
C2 calcium dependent domain containing 4C.
   
  
 0.651
LOC103463745
Importin 13.
      
 0.646
LOC103462735
Uncharacterized protein.
      
 0.646
pik3r4
Phosphoinositide-3-kinase, regulatory subunit 4.
      
 0.646
LOC103478806
Cytochrome b5 reductase 4.
      
 0.646
gatad2b
GATA zinc finger domain containing 2B.
      
 0.646
kbtbd2
Kelch repeat and BTB (POZ) domain containing 2.
      
 0.646
ipo4
Importin 4.
      
 0.566
abcc8
ATP-binding cassette, sub-family C (CFTR/MRP), member 8.
   
  
 0.566
dapk3
Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.
   
  
 0.553
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.