STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
xylt2Xylosyltransferase II. (873 aa)    
Predicted Functional Partners:
LOC103471472
Xylosylprotein beta 1,4-galactosyltransferase, polypeptide 7 (galactosyltransferase I).
     
 0.952
xylt1
Xylosyltransferase I.
  
  
 
0.902
LOC103469073
Xylosyltransferase I.
  
  
 
0.902
LOC103478412
Syndecan; Cell surface proteoglycan; Belongs to the syndecan proteoglycan family.
    
 0.557
fam20b
FAM20B glycosaminoglycan xylosylkinase.
      
 0.501
b3galt6
Hexosyltransferase.
    
 
 0.479
LOC103459210
Decorin; May affect the rate of fibrils formation.
    
 0.450
gpc2
Glypican 2; Cell surface proteoglycan that bears heparan sulfate. Belongs to the glypican family.
    
 0.448
b3gat3
Galactosylgalactosylxylosylprotein 3-beta-glucuronosyltransferase; Belongs to the glycosyltransferase 43 family.
      
 0.440
LOC103481136
FAM20C golgi associated secretory pathway kinase.
      
 0.440
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.