STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
sqorSulfide quinone oxidoreductase. (439 aa)    
Predicted Functional Partners:
LOC103477883
ETHE1 persulfide dioxygenase.
  
 0.987
selenbp1
Selenium binding protein 1.
     
  0.900
Suox
Sulfite oxidase.
   
 0.746
fdx1
2Fe-2S ferredoxin-type domain-containing protein.
  
 0.674
fdx2
Ferredoxin 2.
  
 0.674
ENSPREP00000022561
Uncharacterized protein.
  
 
 0.649
mrpl46
Mitochondrial ribosomal protein L46.
   
 
 0.647
atp5po
ATP synthase peripheral stalk subunit OSCP.
    
 
 0.641
acod1
Aconitate decarboxylase 1.
  
 0.640
ENSPREP00000010947
Uncharacterized protein.
  
 0.640
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.