STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
gpsm2Uncharacterized protein. (659 aa)    
Predicted Functional Partners:
numa1
Calponin-homology (CH) domain-containing protein.
    
 
 0.944
INSC
INSC spindle orientation adaptor protein.
    
 
 0.930
LOC103469622
Whirlin b.
    
 
 0.811
whrn
Whirlin a.
    
 
 0.811
LOC103463747
Uncharacterized protein.
    
 
 0.717
LOC103471308
FERM and PDZ domain containing 1b.
    
 
 0.717
gnat1
Guanine nucleotide binding protein (G protein), alpha transducing activity polypeptide 1.
   
 0.701
LOC103467179
Guanine nucleotide binding protein (G protein), alpha transducing activity polypeptide 2.
   
 0.701
glis2
GLIS family zinc finger 2b.
    
 
 0.690
ENSPREP00000021885
Uncharacterized protein.
   
 0.675
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.