STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSPREP00000023409Uncharacterized protein. (1962 aa)    
Predicted Functional Partners:
LOC103470237
Guanine nucleotide binding protein (G protein), alpha 14a.
      
 0.524
LOC103468589
Uncharacterized protein.
  
     0.493
appbp2
Amyloid beta precursor protein (cytoplasmic tail) binding protein 2.
      
 0.471
LOC103479053
Uncharacterized protein.
  
     0.463
LOC103464097
Uncharacterized protein.
  
     0.446
LOC103462760
Uncharacterized protein.
  
     0.414
LOC103473495
Uncharacterized protein.
  
     0.410
ENSPREP00000015367
Uncharacterized protein.
  
     0.408
LOC103462940
Uncharacterized protein.
  
     0.406
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.