STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
tbcelTubulin folding cofactor E-like b. (432 aa)    
Predicted Functional Partners:
tiprl
TIP41, TOR signaling pathway regulator-like (S. cerevisiae).
      
 0.764
tecta
Tectorin alpha.
 
    
 0.657
nid2
Nidogen 2a (osteonidogen).
      
 0.600
nid1
Nidogen 1a.
      
 0.600
col11a1
Collagen, type XI, alpha 1a.
      
 0.597
tbcb
Tubulin folding cofactor B.
      
 0.528
tbcc
Tubulin folding cofactor C.
      
 0.476
tbcd
Tubulin folding cofactor D.
      
 0.475
tbca
Tubulin-specific chaperone A; Belongs to the TBCA family.
      
 0.468
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.