STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSPREP00000023558PRELI/MSF1 domain-containing protein. (221 aa)    
Predicted Functional Partners:
LOC103469793
SEC14-like lipid binding 8.
 
      0.741
LOC103473217
SEC14-like lipid binding 7.
 
      0.662
sumf1
Sulfatase modifying factor 1.
    
 0.451
ankfy1
Ankyrin repeat and FYVE domain containing 1.
    
 0.427
sec63
SEC63 homolog, protein translocation regulator.
   
 
 0.426
LOC103457001
Phospholipase.
   
 
 0.417
LOC103458417
Phospholipase.
   
 
 0.417
LOC103475777
Phospholipase.
   
 
 0.417
mogat2
Monoacylglycerol O-acyltransferase 2.
   
 
 0.402
dgat2
Diacylglycerol O-acyltransferase 2.
   
 
 0.402
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.