STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC103481888Noggin; Belongs to the noggin family. (212 aa)    
Predicted Functional Partners:
bmp4
Bone morphogenetic protein 4.
    
 0.922
bmp2
Bone morphogenetic protein 2b.
    
 0.913
LOC103474638
Bone morphogenetic protein 16.
    
 0.913
LOC103481120
Noggin; Belongs to the noggin family.
  
  
 
0.903
ENSPREP00000018897
Noggin; Belongs to the noggin family.
  
  
 
0.902
LOC103467591
Bone morphogenetic protein 7b.
    
 0.866
bmp6
Bone morphogenetic protein 6.
    
 0.864
bmp5
Bone morphogenetic protein 5.
    
 0.864
LOC103465082
Bone morphogenetic protein 7a.
    
 0.854
LOC103478252
Growth differentiation factor 6a.
    
 0.813
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.