STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
pjvkPejvakin. (356 aa)    
Predicted Functional Partners:
casp2
Caspase 2, apoptosis-related cysteine peptidase; Belongs to the peptidase C14A family.
     
 0.484
ITPRID2
ITPR interacting domain containing 2.
      
 0.470
xirp2
Xin actin binding repeat containing 2b.
     
 0.460
LOC103474301
Xin actin binding repeat containing 2a.
     
 0.460
xirp1
Xin actin binding repeat containing 1.
     
 0.460
ints11
Integrator complex subunit 11.
      
 0.457
LOC103478146
Si:dkey-71b5.7.
      
 0.434
ENSPREP00000019185
PH domain-containing protein.
     
 0.430
LOC103469440
PH domain-containing protein.
     
 0.430
triobp
PH domain-containing protein.
     
 0.430
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.