STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
rabepkRab9 effector protein with kelch motifs. (353 aa)    
Predicted Functional Partners:
ENSPREP00000004746
V-SNARE coiled-coil homology domain-containing protein.
     
 0.716
ttc8
Tetratricopeptide repeat domain 8.
      
 0.681
aldh6a1
Aldehyde dehydrogenase 6 family member A1.
      
 0.681
LOC103469399
Ankyrin 2a, neuronal.
    
 0.641
LOC103476732
Ankyrin 3a.
    
 0.641
LOC103481688
Uncharacterized protein.
    
 0.641
LOC103470284
Ankyrin 1, erythrocytic a.
    
 0.641
mrc2
Mannose receptor, C type 2.
    
 
 0.636
CCNG2
Cyclin G2; Belongs to the cyclin family.
    
 
 0.623
LOC103473919
Cyclin G2; Belongs to the cyclin family.
    
 
 0.623
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.