STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC103469141GLOBIN domain-containing protein; Belongs to the globin family. (177 aa)    
Predicted Functional Partners:
LOC103478806
Cytochrome b5 reductase 4.
   
 0.666
ngb
GLOBIN domain-containing protein; Belongs to the globin family.
      
 0.553
ENSPREP00000003714
Uncharacterized protein.
   
 
 0.535
ENSPREP00000010333
RNA_pol_Rbc25 domain-containing protein.
      
 0.528
vasn
Vasorin b.
     
 0.500
adm
Adrenomedullin a.
      
 0.475
sigirr
Single immunoglobulin and toll-interleukin 1 receptor (TIR) domain.
      
 0.473
Mb
Myoglobin; Serves as a reserve supply of oxygen and facilitates the movement of oxygen within muscles.
      
0.452
gstk1
Glutathione S-transferase kappa.
      
 0.440
epor
Erythropoietin receptor.
   
  
 0.438
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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