STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC103476835Pyrophosphatase (inorganic) 1b. (291 aa)    
Predicted Functional Partners:
lhpp
Phospholysine phosphohistidine inorganic pyrophosphate phosphatase.
     
 0.928
ppa2
Pyrophosphatase (inorganic) 2.
  
  
 
0.905
LOC103481458
Pyrophosphatase (inorganic) 1a.
  
  
 
0.901
atp5po
ATP synthase peripheral stalk subunit OSCP.
  
 
 0.853
atp5f1c
ATP synthase subunit gamma.
  
 
 0.842
atp6v0b
ATPase H+ transporting V0 subunit b; Belongs to the V-ATPase proteolipid subunit family.
   
 
 0.809
atp5f1a
ATP synthase subunit alpha; Produces ATP from ADP in the presence of a proton gradient across the membrane.
  
 
 0.802
LOC103470111
ATP synthase subunit alpha; Produces ATP from ADP in the presence of a proton gradient across the membrane.
  
 
 0.802
ATP6
ATP synthase subunit a.
  
 
 0.785
atp5mc3
ATP synthase membrane subunit c locus 2; Belongs to the ATPase C chain family.
   
 
 0.781
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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