STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
gon4lMyb-like domain-containing protein. (1572 aa)    
Predicted Functional Partners:
lsm10
LSM10, U7 small nuclear RNA associated.
    
 0.661
cramp1
Cramped chromatin regulator homolog 1.
   
 
 0.639
fancm
Uncharacterized protein.
   
 0.597
pold1
DNA polymerase.
   
 0.569
mcm3ap
Minichromosome maintenance complex component 3 associated protein.
   
   0.559
pold2
Polymerase (DNA directed), delta 2, regulatory subunit.
    
 0.555
lsm11
LSM11, U7 small nuclear RNA associated.
      
 0.548
mus81
MUS81 structure-specific endonuclease subunit.
    
 0.546
LOC103470482
Survival of motor neuron 1, telomeric.
    
 0.543
LOC103472762
Ash1 (absent, small, or homeotic)-like (Drosophila).
   
 
 0.511
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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