STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DCSTAMPDendrocyte expressed seven transmembrane protein. (479 aa)    
Predicted Functional Partners:
LOC103470136
cAMP responsive element binding protein 3-like 3 like.
    
 0.689
tnfsf11
TNF superfamily member 11; Belongs to the tumor necrosis factor family.
      
 0.525
creb3l3
cAMP responsive element binding protein 3-like 3a.
    
 0.513
LOC103472454
Cathepsin S, ortholog 1; Belongs to the peptidase C1 family.
      
 0.475
traf6
TNF receptor-associated factor; Belongs to the TNF receptor-associated factor family.
      
 0.472
LOC103477640
Cathepsin K; Belongs to the peptidase C1 family.
      
 0.472
acp5
Tartrate-resistant acid phosphatase type 5.
      
 0.468
LOC103462946
V-type proton ATPase subunit; Subunit of the integral membrane V0 complex of vacuolar ATPase. Vacuolar ATPase is responsible for acidifying a variety of intracellular compartments in eukaryotic cells, thus providing most of the energy required for transport processes in the vacuolar system. Belongs to the V-ATPase V0D/AC39 subunit family.
   
  
 0.457
nfatc1
Nuclear factor of activated T cells 1.
      
 0.440
LOC103460345
Nuclear factor of activated T cells 1.
      
 0.440
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.