STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC103479830Opioid receptor, kappa 1; Belongs to the G-protein coupled receptor 1 family. (378 aa)    
Predicted Functional Partners:
pnoc
Prepronociceptin a.
   
 0.879
pdyn
Prodynorphin.
   
 
 0.871
LOC103472811
Uncharacterized protein.
   
 0.870
penk
Uncharacterized protein.
    
 0.869
LOC103457563
Uncharacterized protein.
    
  0.707
mecp2
Methyl CpG binding protein 2.
     
 0.689
LOC103457768
Prepronociceptin b.
     
  0.650
POMC
Proopiomelanocortin.
   
 0.645
gal
Galanin/GMAP prepropeptide.
    
 0.605
hook1
Hook microtubule-tethering protein 1.
     
 0.555
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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