STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC103465365Cyclic AMP-dependent transcription factor ATF-7; Plays important functions in early cell signaling. Binds the cAMP response element (CRE) (consensus: 5'-GTGACGT[AG][AG]-3'), a sequence present in many viral and cellular promoters. (498 aa)    
Predicted Functional Partners:
ENSPREP00000002835
Jun proto-oncogene, AP-1 transcription factor subunit; Belongs to the bZIP family.
   
0.825
ENSPREP00000020034
JunE proto-oncogene, AP-1 transcription factor subunit.
   
0.825
c-fos
V-fos FBJ murine osteosarcoma viral oncogene homolog Ab.
    
 0.732
LOC103471253
Mitogen-activated protein kinase.
    
 0.699
mapk10
Mitogen-activated protein kinase.
    
 0.681
LOC103476945
Mitogen-activated protein kinase.
    
 0.681
mapk8
Mitogen-activated protein kinase.
    
 0.681
spc25
SPC25 component of NDC80 kinetochore complex.
   
 0.643
nuf2
UF2 component of NDC80 kinetochore complex.
   
 0.637
LOC103481249
Interferon regulatory factor 3.
    
 
 0.633
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.