STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
zswim2Zinc finger, SWIM-type containing 2. (543 aa)    
Predicted Functional Partners:
uba52
Ubiquitin A-52 residue ribosomal protein fusion product 1.
    
 0.638
rps27a
Ribosomal protein S27a.
    
 0.570
ebna1bp2
EBNA1 binding protein 2.
      
 0.549
Rsph14
Uncharacterized protein.
      
 0.536
trip12
Thyroid hormone receptor interactor 12.
   
 
 0.527
rxfp1
Relaxin family peptide receptor 1.
   
 0.487
rxfp2
Relaxin family peptide receptor 2a.
   
 0.487
dlec1
DLEC1 cilia and flagella associated protein.
    
 
 0.475
LGR5
Leucine rich repeat containing G protein-coupled receptor 5.
    
 0.473
lgr4
Leucine-rich repeat containing G protein-coupled receptor 4.
    
 0.473
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.