STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
atp23Mitochondrial inner membrane protease ATP23; Belongs to the peptidase M76 family. (233 aa)    
Predicted Functional Partners:
phb
Prohibitin.
    
 
 0.699
oma1
OMA1 zinc metallopeptidase.
    
 
 0.667
ATP6
ATP synthase subunit a.
    
 
 0.666
mipep
Mitochondrial intermediate peptidase.
      
 0.650
dpp3
Dipeptidyl peptidase 3; Belongs to the peptidase M49 family.
      
 0.649
chchd4
Coiled-coil-helix-coiled-coil-helix domain containing 4a.
    
 
 0.645
LOC103465236
Coiled-coil-helix-coiled-coil-helix domain containing 4b.
    
 
 0.631
xpnpep3
X-prolyl aminopeptidase 3, mitochondrial.
      
 0.615
ENSPREP00000006614
Prohibitin.
    
 
 0.588
phb2
Prohibitin.
    
 
 0.588
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.