LOC103464117 protein (Poecilia reticulata) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

LOC103464117

Mitochondrial import inner membrane translocase subunit TIM44; Essential component of the PAM complex, a complex required for the translocation of transit peptide-containing proteins from the inner membrane into the mitochondrial matrix in an ATP-dependent manner; Belongs to the Tim44 family. (431 aa)

Predicted Functional Partners:

timm23

0.964

hspa9

0.962

grpel1

0.951

timm50

0.832

timm17b

0.817

Timm17a

0.817

timm21

0.767

dnajc15

0.745

ENSPREP00000006393

0.745

dnajc19

0.745

Your Current Organism:

Poecilia reticulata

NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSPREP00000006393	LOC103464117	ENSPREP00000006393	ENSPREP00000024085	Si:ch211-161c3.5.	Mitochondrial import inner membrane translocase subunit TIM44; Essential component of the PAM complex, a complex required for the translocation of transit peptide-containing proteins from the inner membrane into the mitochondrial matrix in an ATP-dependent manner; Belongs to the Tim44 family.	0.745
ENSPREP00000006393	Timm17a	ENSPREP00000006393	ENSPREP00000013387	Si:ch211-161c3.5.	Uncharacterized protein.	0.700
ENSPREP00000006393	grpel1	ENSPREP00000006393	ENSPREP00000007180	Si:ch211-161c3.5.	GrpE protein homolog; Essential component of the PAM complex, a complex required for the translocation of transit peptide-containing proteins from the inner membrane into the mitochondrial matrix in an ATP-dependent manner; Belongs to the GrpE family.	0.723
ENSPREP00000006393	hspa9	ENSPREP00000006393	ENSPREP00000001232	Si:ch211-161c3.5.	Heat shock protein 9; Belongs to the heat shock protein 70 family.	0.860
ENSPREP00000006393	timm17b	ENSPREP00000006393	ENSPREP00000003656	Si:ch211-161c3.5.	Translocase of inner mitochondrial membrane 17 homolog B (yeast).	0.700
ENSPREP00000006393	timm21	ENSPREP00000006393	ENSPREP00000020687	Si:ch211-161c3.5.	Uncharacterized protein.	0.680
ENSPREP00000006393	timm23	ENSPREP00000006393	ENSPREP00000013416	Si:ch211-161c3.5.	Mitochondrial import inner membrane translocase subunit TIM23; Essential component of the TIM23 complex, a complex that mediates the translocation of transit peptide-containing proteins across the mitochondrial inner membrane.	0.826
ENSPREP00000006393	timm50	ENSPREP00000006393	ENSPREP00000009679	Si:ch211-161c3.5.	Mitochondrial import inner membrane translocase subunit TIM50; Essential component of the TIM23 complex, a complex that mediates the translocation of transit peptide-containing proteins across the mitochondrial inner membrane.	0.667
LOC103464117	ENSPREP00000006393	ENSPREP00000024085	ENSPREP00000006393	Mitochondrial import inner membrane translocase subunit TIM44; Essential component of the PAM complex, a complex required for the translocation of transit peptide-containing proteins from the inner membrane into the mitochondrial matrix in an ATP-dependent manner; Belongs to the Tim44 family.	Si:ch211-161c3.5.	0.745
LOC103464117	Timm17a	ENSPREP00000024085	ENSPREP00000013387	Mitochondrial import inner membrane translocase subunit TIM44; Essential component of the PAM complex, a complex required for the translocation of transit peptide-containing proteins from the inner membrane into the mitochondrial matrix in an ATP-dependent manner; Belongs to the Tim44 family.	Uncharacterized protein.	0.817
LOC103464117	dnajc15	ENSPREP00000024085	ENSPREP00000006043	Mitochondrial import inner membrane translocase subunit TIM44; Essential component of the PAM complex, a complex required for the translocation of transit peptide-containing proteins from the inner membrane into the mitochondrial matrix in an ATP-dependent manner; Belongs to the Tim44 family.	DnaJ (Hsp40) homolog, subfamily C, member 15.	0.745
LOC103464117	dnajc19	ENSPREP00000024085	ENSPREP00000033542	Mitochondrial import inner membrane translocase subunit TIM44; Essential component of the PAM complex, a complex required for the translocation of transit peptide-containing proteins from the inner membrane into the mitochondrial matrix in an ATP-dependent manner; Belongs to the Tim44 family.	DnaJ (Hsp40) homolog, subfamily C, member 19.	0.745
LOC103464117	grpel1	ENSPREP00000024085	ENSPREP00000007180	Mitochondrial import inner membrane translocase subunit TIM44; Essential component of the PAM complex, a complex required for the translocation of transit peptide-containing proteins from the inner membrane into the mitochondrial matrix in an ATP-dependent manner; Belongs to the Tim44 family.	GrpE protein homolog; Essential component of the PAM complex, a complex required for the translocation of transit peptide-containing proteins from the inner membrane into the mitochondrial matrix in an ATP-dependent manner; Belongs to the GrpE family.	0.951
LOC103464117	hspa9	ENSPREP00000024085	ENSPREP00000001232	Mitochondrial import inner membrane translocase subunit TIM44; Essential component of the PAM complex, a complex required for the translocation of transit peptide-containing proteins from the inner membrane into the mitochondrial matrix in an ATP-dependent manner; Belongs to the Tim44 family.	Heat shock protein 9; Belongs to the heat shock protein 70 family.	0.962
LOC103464117	timm17b	ENSPREP00000024085	ENSPREP00000003656	Mitochondrial import inner membrane translocase subunit TIM44; Essential component of the PAM complex, a complex required for the translocation of transit peptide-containing proteins from the inner membrane into the mitochondrial matrix in an ATP-dependent manner; Belongs to the Tim44 family.	Translocase of inner mitochondrial membrane 17 homolog B (yeast).	0.817
LOC103464117	timm21	ENSPREP00000024085	ENSPREP00000020687	Mitochondrial import inner membrane translocase subunit TIM44; Essential component of the PAM complex, a complex required for the translocation of transit peptide-containing proteins from the inner membrane into the mitochondrial matrix in an ATP-dependent manner; Belongs to the Tim44 family.	Uncharacterized protein.	0.767
LOC103464117	timm23	ENSPREP00000024085	ENSPREP00000013416	Mitochondrial import inner membrane translocase subunit TIM44; Essential component of the PAM complex, a complex required for the translocation of transit peptide-containing proteins from the inner membrane into the mitochondrial matrix in an ATP-dependent manner; Belongs to the Tim44 family.	Mitochondrial import inner membrane translocase subunit TIM23; Essential component of the TIM23 complex, a complex that mediates the translocation of transit peptide-containing proteins across the mitochondrial inner membrane.	0.964
LOC103464117	timm50	ENSPREP00000024085	ENSPREP00000009679	Mitochondrial import inner membrane translocase subunit TIM44; Essential component of the PAM complex, a complex required for the translocation of transit peptide-containing proteins from the inner membrane into the mitochondrial matrix in an ATP-dependent manner; Belongs to the Tim44 family.	Mitochondrial import inner membrane translocase subunit TIM50; Essential component of the TIM23 complex, a complex that mediates the translocation of transit peptide-containing proteins across the mitochondrial inner membrane.	0.832
Timm17a	ENSPREP00000006393	ENSPREP00000013387	ENSPREP00000006393	Uncharacterized protein.	Si:ch211-161c3.5.	0.700
Timm17a	LOC103464117	ENSPREP00000013387	ENSPREP00000024085	Uncharacterized protein.	Mitochondrial import inner membrane translocase subunit TIM44; Essential component of the PAM complex, a complex required for the translocation of transit peptide-containing proteins from the inner membrane into the mitochondrial matrix in an ATP-dependent manner; Belongs to the Tim44 family.	0.817

page 1 of 6

Server load: low (22%) [HD]

Permalink

Network

Neighborhood

Experiments

Cooccurrence

Databases

Coexpression

Textmining

Fusion

© STRING Consortium 2024

Credits

Access

Info

About