STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
b9d1B9 protein domain 1. (208 aa)    
Predicted Functional Partners:
B9d2
Uncharacterized protein.
   
 0.983
mks1
MKS transition zone complex subunit 1.
    
 0.924
tctn2
Tectonic family member 2.
   
 0.904
tctn1
DUF1619 domain-containing protein.
    
 0.902
cc2d2a
Coiled-coil and C2 domain containing 2A.
    
 0.893
tmem67
Transmembrane protein 67.
     
 0.873
LOC103461065
DUF1619 domain-containing protein.
    
 0.869
LOC103471469
Transmembrane protein 216.
     
 0.869
ENSPREP00000022685
Abelson helper integration site 1.
    
 0.863
tmem231
Transmembrane protein 231.
   
 
 0.827
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.