STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSPREP00000024139RP1 axonemal microtubule associated. (235 aa)    
Predicted Functional Partners:
cdc73
Cell division cycle 73, Paf1/RNA polymerase II complex component, homolog (S. cerevisiae).
   
 0.800
paf1
PAF1 homolog, Paf1/RNA polymerase II complex component.
   
 0.759
cinp
Cyclin-dependent kinase 2 interacting protein.
   
 0.709
ctr9
CTR9 homolog, Paf1/RNA polymerase II complex component.
   
 0.709
pot1
Telo_bind domain-containing protein.
    
 
 0.674
rtf1
RTF1 homolog, Paf1/RNA polymerase II complex component.
    
 0.614
aurka
Aurora kinase A; Belongs to the protein kinase superfamily.
    
 
 0.595
LOC103471497
Aurora kinase B; Belongs to the protein kinase superfamily.
    
 
 0.595
stam2
Signal transducing adaptor molecule (SH3 domain and ITAM motif) 2.
   
 
 0.578
stam
Signal transducing adaptor molecule (SH3 domain and ITAM motif) 1.
   
 
 0.578
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.