STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cd82Tetraspanin. (255 aa)    
Predicted Functional Partners:
LOC103460096
Tetraspanin.
  
  
 
0.902
LOC103477524
Tetraspanin.
     
 
0.900
LOC103471006
Interferon regulatory factor 2.
      
 0.597
LOC103471313
Toll-like receptor 1.
   
  
 0.597
il17ra
SEFIR domain-containing protein.
      
 0.597
trim25
Tripartite motif containing 25.
      
 0.593
irf7
Interferon regulatory factor 7.
      
 0.593
LOC103467449
Toll-like receptor 9; Belongs to the Toll-like receptor family.
      
 0.591
ENSPREP00000001090
Uncharacterized protein; Belongs to the tetraspanin (TM4SF) family.
    
 
 0.536
ENSPREP00000025426
NACHT domain-containing protein.
   
  
 0.528
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.