STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSPREP00000024223Uncharacterized protein. (147 aa)    
Predicted Functional Partners:
kcnq1
Potassium voltage-gated channel, KQT-like subfamily, member 1.1; Belongs to the potassium channel family.
    
 0.787
ENSPREP00000028578
Ion_trans domain-containing protein; Belongs to the potassium channel family.
    
 0.787
lipt2
Putative lipoyltransferase 2, mitochondrial; Catalyzes the transfer of endogenously produced octanoic acid from octanoyl-acyl-carrier-protein onto the lipoyl domains of lipoate- dependent enzymes. Lipoyl-ACP can also act as a substrate although octanoyl-ACP is likely to be the physiological substrate. Belongs to the LipB family.
      
 0.549
Kcne4
Potassium voltage-gated channel, Isk-related family, member 4.
      
 0.468
LOC103476466
Potassium voltage-gated channel, KQT-like subfamily, member 5a; Belongs to the potassium channel family.
    
 0.411
LOC103463080
Potassium voltage-gated channel, KQT-like subfamily, member 5b; Belongs to the potassium channel family.
    
 0.411
KCNQ4
Potassium voltage-gated channel subfamily Q member 4; Belongs to the potassium channel family.
    
 0.411
LOC103467116
Potassium voltage-gated channel, KQT-like subfamily, member 2a; Belongs to the potassium channel family.
    
 0.411
LOC103460359
Uncharacterized protein; Belongs to the potassium channel family.
    
 0.411
kcnq3
Potassium voltage-gated channel, KQT-like subfamily, member 3; Belongs to the potassium channel family.
    
 0.411
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.